Publications

Yildiz publications

Some recent publications:

1: Teschler JK, Zamorano-Sánchez D, Utada AS, Warner CJ, Wong GC, Linington RG, Yildiz FH. Living in the matrix: assembly and control of Vibrio cholerae biofilms. Nat Rev Microbiol. 2015 Apr 16;13(5):255-68. doi: 10.1038/nrmicro3433. PubMed PMID: 25895940.

2: Townsley L, Yildiz FH. Temperature affects c-di-GMP signalling and biofilm formation in Vibrio cholerae. Environ Microbiol. 2015 Feb 12. doi: 10.1111/1462-2920.12799. [Epub ahead of print] PubMed PMID: 25684220.

3: Zamorano-Sánchez D, Fong JC, Kilic S, Erill I, Yildiz FH. Identification and Characterization of VpsR and VpsT Binding Sites in Vibrio cholerae. J Bacteriol. 2015 Apr 1;197(7):1221-35. doi: 10.1128/JB.02439-14. Epub 2015 Jan 26. PubMed PMID: 25622616; PubMed Central PMCID: PMC4352665.

4: Bilecen K, Fong JC, Cheng A, Jones CJ, Zamorano-Sánchez D, Yildiz FH. Polymyxin B resistance and biofilm formation in Vibrio cholerae are controlled by the response regulator CarR. Infect Immun. 2015 Mar;83(3):1199-209. doi: 10.1128/IAI.02700-14. Epub 2015 Jan 12. PubMed PMID: 25583523; PubMed Central PMCID: PMC4333464.

5: Warner CJ, Cheng AT, Yildiz FH, Linington RG. Development of benzo[1,4]oxazines as biofilm inhibitors and dispersal agents against Vibrio cholerae. Chem Commun (Camb). 2015 Jan 25;51(7):1305-8. doi: 10.1039/c4cc07003h. PubMed PMID: 25479128; PubMed Central PMCID: PMC4288701.

6: Hollenbeck EC, Fong JC, Lim JY, Yildiz FH, Fuller GG, Cegelski L. Molecular determinants of mechanical properties of V. cholerae biofilms at the air-liquid interface. Biophys J. 2014 Nov 18;107(10):2245-52. doi: 10.1016/j.bpj.2014.10.015. PubMed PMID: 25418293; PubMed Central PMCID: PMC4241461.

7: Johnson TL, Fong JC, Rule C, Rogers A, Yildiz FH, Sandkvist M. The Type II secretion system delivers matrix proteins for biofilm formation by Vibrio cholerae. J Bacteriol. 2014 Dec;196(24):4245-52. doi: 10.1128/JB.01944-14. Epub 2014 Sep 29. PubMed PMID: 25266381; PubMed Central PMCID: PMC4248848.

8: Utada AS, Bennett RR, Fong JC, Gibiansky ML, Yildiz FH, Golestanian R, Wong GC. Vibrio cholerae use pili and flagella synergistically to effect motility switching and conditional surface attachment. Nat Commun. 2014 Sep 19;5:4913. doi: 10.1038/ncomms5913. PubMed PMID: 25234699.

9: Song T, Sabharwal D, Gurung JM, Cheng AT, Sjöström AE, Yildiz FH, Uhlin BE, Wai SN. Vibrio cholerae utilizes direct sRNA regulation in expression of a biofilm matrix protein. PLoS One. 2014 Jul 23;9(7):e101280. doi: 10.1371/journal.pone.0101280. eCollection 2014. PubMed PMID: 25054332; PubMed Central PMCID: PMC4108314.

10: Reichhardt C, Fong JC, Yildiz F, Cegelski L. Characterization of the Vibrio cholerae extracellular matrix: a top-down solid-state NMR approach. Biochim Biophys Acta. 2015 Jan;1848(1 Pt B):378-83. doi: 10.1016/j.bbamem.2014.05.030. Epub 2014 Jun 7. PubMed PMID: 24911407; PubMed Central PMCID: PMC4406247.

11: Yildiz F, Fong J, Sadovskaya I, Grard T, Vinogradov E. Structural characterization of the extracellular polysaccharide from Vibrio cholerae O1 El-Tor. PLoS One. 2014 Jan 24;9(1):e86751. doi: 10.1371/journal.pone.0086751. eCollection 2014. PubMed PMID: 24520310; PubMed Central PMCID: PMC3901696.

12: Navarro G, Cheng AT, Peach KC, Bray WM, Bernan VS, Yildiz FH, Linington RG. Image-based 384-well high-throughput screening method for the discovery of skyllamycins A to C as biofilm inhibitors and inducers of biofilm detachment in Pseudomonas aeruginosa. Antimicrob Agents Chemother. 2014;58(2):1092-9. doi: 10.1128/AAC.01781-13. Epub 2013 Dec 2. PubMed PMID: 24295976; PubMed Central PMCID: PMC3910817.

13: Peach KC, Cheng AT, Oliver AG, Yildiz FH, Linington RG. Discovery and biological characterization of the auromomycin chromophore as an inhibitor of biofilm formation in Vibrio cholerae. Chembiochem. 2013 Nov 4;14(16):2209-15. doi: 10.1002/cbic.201300131. Epub 2013 Sep 17. PubMed PMID: 24106077; PubMed Central PMCID: PMC3947468.

14: Giglio KM, Fong JC, Yildiz FH, Sondermann H. Structural basis for biofilm formation via the Vibrio cholerae matrix protein RbmA. J Bacteriol. 2013 Jul;195(14):3277-86. doi: 10.1128/JB.00374-13. Epub 2013 May 17. PubMed PMID: 23687270; PubMed Central PMCID: PMC3697633.

15: León B, Fong JC, Peach KC, Wong WR, Yildiz FH, Linington RG. Development of quinoline-based disruptors of biofilm formation against Vibrio cholerae. Org Lett. 2013 Mar 15;15(6):1234-7. doi: 10.1021/ol400150z. Epub 2013 Mar 5. PubMed PMID: 23461487.

16: Berk V, Fong JC, Dempsey GT, Develioglu ON, Zhuang X, Liphardt J, Yildiz FH, Chu S. Molecular architecture and assembly principles of Vibrio cholerae biofilms. Science. 2012 Jul 13;337(6091):236-9. doi: 10.1126/science.1222981. PubMed PMID: 22798614; PubMed Central PMCID: PMC3513368.